Sitemap
A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
Pages
Posts
Future Blog Post
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Blog Post number 4
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 3
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 2
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 1
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
portfolio
Portfolio item number 1
Short description of portfolio item number 1
Portfolio item number 2
Short description of portfolio item number 2
publications
MSAGPT: Neural Prompting Protein Structure Prediction via MSA Generative Pre-Training
Published in NeurIPS, 2024
Employing a 2D evolutionary positional encoding scheme and learning from AlphaFold2 Feedback, MSAGPT generates constructive virtual MSA that enables accurate protein structure predictions in situations where natural co-evolutionary information is scarce.
xTrimoPGLM: Unified 100B-Scale Pre-trained Transformer for Deciphering the Language of Protein
Published in Nature Methods, 2025
We propose a 100-billion-parameter unified protein language model, xTrimoPGLM, optimizing both protein understanding and generation objectives simultaneously through an innovative pre-training framework, demonstrating State-Of-The-Art performance on 18 protein understanding benchmarks, and powerful de novo and conditional sequence generation abilities.
Mimyr: Generative modeling of missing tissue in spatial transcriptomics
Preprint on bioRxiv, 2025
Mimyr is a generative framework for reconstructing missing regions and virtual slices in spatial transcriptomics data caused by tissue damage or incomplete sampling. It jointly predicts cell locations, cell types, and gene expression profiles using a three-staged pipeline. Mimyr produces realistic, high-fidelity reconstructions across experimental settings and outperforms existing methods in both accuracy, efficiency and robustness.
talks
Talk 1 on Relevant Topic in Your Field
Published:
This is a description of your talk, which is a markdown files that can be all markdown-ified like any other post. Yay markdown!
Conference Proceeding talk 3 on Relevant Topic in Your Field
Published:
This is a description of your conference proceedings talk, note the different field in type. You can put anything in this field.
teaching
Teaching experience 1
Undergraduate course, University 1, Department, 2014
This is a description of a teaching experience. You can use markdown like any other post.
Teaching experience 2
Workshop, University 1, Department, 2015
This is a description of a teaching experience. You can use markdown like any other post.